Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system substrate-binding protein | SAMN04244553_4137 | Not Available | Positive | 4310793 - 4312433 | 59274.4 |
| peptide/nickel transport system substrate-binding protein | SAMN04244553_4138 | Not Available | Positive | 4312469 - 4314139 | 60322.9 |
| hypothetical protein | SAMN04244553_4139 | Not Available | Positive | 4314136 - 4314792 | 22895.8 |
| regulatory protein, gntr family | SAMN04244553_4140 | Not Available | Positive | 4315042 - 4316010 | 34076.3 |
| fatty acid hydroxylase superfamily protein | SAMN04244553_4141 | Not Available | Positive | 4316035 - 4316694 | 25030.8 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_4142 | Not Available | Positive | 4316887 - 4318155 | 42504.0 |
| copper chaperone copz | SAMN04244553_4143 | Not Available | Positive | 4318210 - 4318431 | 7132.44 |
| hypothetical protein | SAMN04244553_4144 | Not Available | Positive | 4318465 - 4319394 | 31766.0 |
| cu+-exporting atpase | SAMN04244553_4145 | Not Available | Positive | 4319425 - 4321746 | 79945.5 |
| elongation factor tu | SAMN04244553_4146 | Not Available | Positive | 4322139 - 4323320 | 41723.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

