Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-phosphoribosyl-monophospho-decaprenol phosphatase | SAMN04244553_4117 | Not Available | Negative | 4288071 - 4288643 | 19767.1 |
| galactofuranosylgalactofuranosylrhamnosyl-n- acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase | SAMN04244553_4118 | Not Available | Negative | 4288643 - 4290574 | 71252.3 |
| udp-galactopyranose mutase | SAMN04244553_4119 | Not Available | Negative | 4290571 - 4291875 | 49156.8 |
| hypothetical protein | SAMN04244553_4120 | Not Available | Positive | 4291925 - 4292917 | 35351.6 |
| hypothetical protein | SAMN04244553_4121 | Not Available | Positive | 4292866 - 4293090 | 7612.44 |
| short chain dehydrogenase | SAMN04244553_4122 | Not Available | Negative | 4293189 - 4293911 | 25742.8 |
| transcriptional regulator, tetr family | SAMN04244553_4123 | Not Available | Positive | 4294016 - 4294642 | 23005.5 |
| hypothetical protein | SAMN04244553_4124 | Not Available | Negative | 4294755 - 4295534 | 27814.4 |
| serine/threonine protein kinase | SAMN04244553_4125 | Not Available | Negative | 4295644 - 4296132 | 16533.5 |
| hypothetical protein | SAMN04244553_4126 | Not Available | Negative | 4296273 - 4296806 | 17917.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

