Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable f420-dependent oxidoreductase, msmeg_2516 family | SAMN04244553_4107 | Not Available | Negative | 4274752 - 4275771 | 36563.1 |
| cutinase | SAMN04244553_4108 | Not Available | Negative | 4275940 - 4276920 | 34221.2 |
| protein of unknown function | SAMN04244553_4109 | Not Available | Negative | 4276917 - 4277465 | 18639.6 |
| s-formylglutathione hydrolase frmb | SAMN04244553_4110 | Not Available | Negative | 4277568 - 4279349 | 63092.3 |
| diacylglycerol o-acyltransferase / trehalose o-mycolyltransferase | SAMN04244553_4111 | Not Available | Negative | 4279604 - 4280641 | 37223.5 |
| diacylglycerol o-acyltransferase / trehalose o-mycolyltransferase | SAMN04244553_4112 | Not Available | Negative | 4280940 - 4281938 | 36119.8 |
| diacylglycerol o-acyltransferase / trehalose o-mycolyltransferase | SAMN04244553_4113 | Not Available | Negative | 4282361 - 4283365 | 35440.2 |
| diacylglycerol o-acyltransferase / trehalose o-mycolyltransferase | SAMN04244553_4114 | Not Available | Negative | 4283818 - 4284891 | 38280.6 |
| arabinofuranosyltransferase | SAMN04244553_4115 | Not Available | Negative | 4285140 - 4287089 | 71773.1 |
| decaprenyl-phosphate phosphoribosyltransferase | SAMN04244553_4116 | Not Available | Negative | 4287067 - 4287993 | 32800.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

