Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted nucleic acid-binding protein, contains pin domain | SAMN04244553_4097 | Not Available | Positive | 4252710 - 4253144 | 15967.8 |
| galactan 5-o-arabinofuranosyltransferase | SAMN04244553_4098 | Not Available | Positive | 4253365 - 4255530 | 76274.0 |
| hypothetical protein | SAMN04244553_4099 | Not Available | Positive | 4255698 - 4257644 | 69418.2 |
| arabinosyltransferase c | SAMN04244553_4100 | Not Available | Positive | 4257837 - 4261091 | 115775.0 |
| hypothetical protein | SAMN04244553_4101 | Not Available | Positive | 4261337 - 4261504 | 6440.91 |
| arabinosyltransferase b | SAMN04244553_4102 | Not Available | Negative | 4261666 - 4265028 | 120520.0 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04244553_4103 | Not Available | Positive | 4265135 - 4265638 | 17972.2 |
| acetyl-coa carboxylase, carboxyltransferase component | SAMN04244553_4104 | Not Available | Negative | 4265710 - 4267254 | 55402.4 |
| polyketide synthase 13 | SAMN04244553_4105 | Not Available | Negative | 4267251 - 4272527 | 186526.0 |
| fatty acid coa ligase fadd32 | SAMN04244553_4106 | Not Available | Negative | 4272639 - 4274558 | 69406.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

