Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | SAMN04244553_4037 | Not Available | Positive | 4190451 - 4190729 | 10447.2 |
| fatty acid coa ligase fadd32 | SAMN04244553_4038 | Not Available | Negative | 4190742 - 4192661 | 69007.3 |
| beta-ketoacyl acp synthase | SAMN04244553_4039 | Not Available | Negative | 4192802 - 4194052 | 43004.3 |
| dna (cytosine-5)-methyltransferase 1 | SAMN04244553_4040 | Not Available | Positive | 4194323 - 4195510 | 42640.4 |
| t/g mismatch-specific endonuclease | SAMN04244553_4041 | Not Available | Positive | 4195515 - 4195931 | 15734.7 |
| protein of unknown function | SAMN04244553_4042 | Not Available | Positive | 4196105 - 4196908 | 28950.1 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04244553_4043 | Not Available | Positive | 4196979 - 4197398 | 14788.4 |
| maleylpyruvate isomerase | SAMN04244553_4044 | Not Available | Positive | 4197459 - 4198187 | 26129.8 |
| chat domain-containing protein | SAMN04244553_4045 | Not Available | Negative | 4198194 - 4200980 | 100892.0 |
| lecithin:cholesterol acyltransferase | SAMN04244553_4046 | Not Available | Negative | 4200983 - 4202389 | 51029.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

