Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_4006 | Not Available | Positive | 4158829 - 4159377 | 19937.4 |
| glutamyl-trna synthetase | SAMN04244553_4007 | Not Available | Positive | 4159399 - 4160346 | 34057.6 |
| uncharacterized membrane protein yckc, rdd family | SAMN04244553_4008 | Not Available | Positive | 4160393 - 4161124 | 26075.8 |
| protein of unknown function | SAMN04244553_4009 | Not Available | Negative | 4161324 - 4161881 | 19499.8 |
| hypothetical protein | SAMN04244553_4010 | Not Available | Positive | 4162006 - 4162779 | 28203.6 |
| pp_03664 | SAMN04244553_4011 | Not Available | Negative | 4162859 - 4164235 | Not Available |
| saccharopine dehydrogenase nadp binding domain-containing protein | SAMN04244553_4012 | Not Available | Negative | 4164845 - 4165798 | 33791.7 |
| transcriptional regulator, tetr family | SAMN04244553_4013 | Not Available | Positive | 4165848 - 4166480 | 23275.1 |
| uncharacterized conserved protein | SAMN04244553_4014 | Not Available | Negative | 4166486 - 4167550 | 40782.4 |
| atp-binding cassette, subfamily b | SAMN04244553_4015 | Not Available | Negative | 4167782 - 4169701 | 70106.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

