Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_3996 | Not Available | Negative | 4147872 - 4148036 | 5499.6 |
| s-formylglutathione hydrolase frmb | SAMN04244553_3997 | Not Available | Negative | 4148105 - 4149124 | 36007.5 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04244553_3998 | Not Available | Negative | 4149395 - 4150204 | 28692.8 |
| hypothetical protein | SAMN04244553_3999 | Not Available | Positive | 4150385 - 4151065 | 24665.3 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN04244553_4000 | Not Available | Negative | 4151353 - 4151799 | 15913.0 |
| hypothetical protein | SAMN04244553_4001 | Not Available | Negative | 4151796 - 4154024 | 80766.8 |
| hypothetical protein | SAMN04244553_4002 | Not Available | Positive | 4154171 - 4154626 | 17474.4 |
| wax ester synthase-like acyl-coa acyltransferase domain-containing protein | SAMN04244553_4003 | Not Available | Negative | 4154681 - 4156375 | 59782.7 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | SAMN04244553_4004 | Not Available | Positive | 4156478 - 4158118 | 60706.0 |
| protein of unknown function | SAMN04244553_4005 | Not Available | Negative | 4158200 - 4158409 | 7151.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

