Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04244553_3984 | Not Available | Positive | 4137027 - 4137833 | 28366.6 |
| ligand-binding srpbcc domain-containing protein | SAMN04244553_3985 | Not Available | Positive | 4137844 - 4138281 | 16207.5 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04244553_3986 | Not Available | Negative | 4138477 - 4139766 | 46569.8 |
| Trna-ser | Not Available | Not Available | Positive | 4140257 - 4140344 | Not Available |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04244553_3989 | Not Available | Positive | 4140424 - 4141596 | 41728.2 |
| dj-1/pfpi family protein | SAMN04244553_3990 | Not Available | Positive | 4141593 - 4142354 | 26752.8 |
| glutamate or tyrosine decarboxylase | SAMN04244553_3991 | Not Available | Negative | 4142503 - 4143954 | 52058.4 |
| conserved hypothetical protein | SAMN04244553_3992 | Not Available | Negative | 4144104 - 4145156 | 37985.0 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04244553_3993 | Not Available | Positive | 4145259 - 4146221 | 34775.6 |
| hypothetical protein | SAMN04244553_3994 | Not Available | Negative | 4146445 - 4146936 | 17821.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

