Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_3931 | Not Available | Negative | 4073201 - 4073650 | 14979.8 |
| dna polymerase iii, alpha subunit | SAMN04244553_3932 | Not Available | Positive | 4073967 - 4077512 | 129153.0 |
| hypothetical protein | SAMN04244553_3933 | Not Available | Positive | 4077978 - 4078379 | 13857.6 |
| methyltransferase domain-containing protein | SAMN04244553_3934 | Not Available | Negative | 4078580 - 4079194 | 22079.6 |
| maltooligosyltrehalose trehalohydrolase | SAMN04244553_3935 | Not Available | Positive | 4079553 - 4081298 | 63952.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN04244553_3936 | Not Available | Positive | 4081383 - 4082603 | 42576.6 |
| l-threonine ammonia-lyase | SAMN04244553_3937 | Not Available | Negative | 4082666 - 4084003 | 46281.4 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN04244553_3938 | Not Available | Negative | 4084085 - 4084519 | 16292.3 |
| hypothetical protein | SAMN04244553_3939 | Not Available | Positive | 4084607 - 4084846 | 8115.11 |
| regulatory protein, luxr family | SAMN04244553_3940 | Not Available | Negative | 4084969 - 4087653 | 93997.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

