Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | SAMN04244553_3881 | Not Available | Negative | 4014422 - 4015039 | 23082.4 |
| hypothetical protein | SAMN04244553_3882 | Not Available | Positive | 4015179 - 4015616 | 15701.7 |
| protein of unknown function | SAMN04244553_3883 | Not Available | Positive | 4015743 - 4016168 | 14949.1 |
| mraz protein | SAMN04244553_3884 | Not Available | Positive | 4016662 - 4017093 | 15962.6 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN04244553_3886 | Not Available | Positive | 4017328 - 4018302 | 35450.6 |
| hypothetical protein | SAMN04244553_3887 | Not Available | Positive | 4018454 - 4019341 | 30182.8 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN04244553_3888 | Not Available | Positive | 4019338 - 4021224 | 66842.1 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN04244553_3889 | Not Available | Positive | 4021379 - 4022953 | 53901.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN04244553_3890 | Not Available | Positive | 4023030 - 4024547 | 51570.3 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN04244553_3891 | Not Available | Positive | 4024728 - 4025804 | 37993.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

