Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydrogenase | SAMN04244553_0481 | Not Available | Negative | 287280 - 288311 | 36122.6 |
| limonene 1,2-monooxygenase | SAMN04244553_0482 | Not Available | Negative | 288311 - 289522 | 43908.4 |
| 2,3-dihydroxybiphenyl 1,2-dioxygenase | SAMN04244553_0483 | Not Available | Negative | 289554 - 290438 | 32016.8 |
| 3-ketosteroid 9alpha-monooxygenase subunit b | SAMN04244553_0484 | Not Available | Negative | 290452 - 291456 | 36091.8 |
| hypothetical protein | SAMN04244553_0485 | Not Available | Negative | 291453 - 291677 | 7555.0 |
| 3-ketosteroid 9alpha-monooxygenase subunit a | SAMN04244553_0486 | Not Available | Negative | 291688 - 292839 | 43044.5 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04244553_0487 | Not Available | Negative | 292954 - 293430 | 17404.6 |
| transcriptional regulator, iclr family | SAMN04244553_0488 | Not Available | Positive | 293672 - 294511 | 30209.8 |
| hypothetical protein | SAMN04244553_0489 | Not Available | Negative | 294810 - 295415 | 21565.2 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN04244553_0490 | Not Available | Negative | 295695 - 296660 | 35370.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

