Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_3861 | Not Available | Positive | 3989154 - 3989522 | 13370.2 |
| phytoene synthase | SAMN04244553_3862 | Not Available | Negative | 3989619 - 3990758 | 41269.0 |
| alpha-1,6-mannosyltransferase | SAMN04244553_3863 | Not Available | Negative | 3990755 - 3992515 | 62289.6 |
| phytoene desaturase | SAMN04244553_3864 | Not Available | Negative | 3992600 - 3994183 | 57177.4 |
| hypothetical protein | SAMN04244553_3865 | Not Available | Negative | 3994426 - 3994632 | 7050.56 |
| geranylgeranyl diphosphate synthase, type i | SAMN04244553_3866 | Not Available | Negative | 3994629 - 3995792 | 40777.2 |
| methylenetetrahydrofolate reductase (nadph) | SAMN04244553_3867 | Not Available | Positive | 3996029 - 3997015 | 35641.6 |
| luciferase family oxidoreductase, group 1 | SAMN04244553_3868 | Not Available | Negative | 3997069 - 3998220 | 40481.8 |
| hypothetical protein | SAMN04244553_3869 | Not Available | Negative | 3998217 - 3999026 | 28966.2 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN04244553_3870 | Not Available | Negative | 3999023 - 4000396 | 50194.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

