Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_3851 | Not Available | Negative | 3978069 - 3978491 | 14902.8 |
| cytochrome c oxidase subunit 3 | SAMN04244553_3852 | Not Available | Positive | 3978696 - 3979307 | 22401.4 |
| ubiquinol-cytochrome c reductase cytochrome c subunit | SAMN04244553_3853 | Not Available | Positive | 3979361 - 3980224 | 29834.5 |
| menaquinol-cytochrome c reductase iron-sulfur subunit precursor | SAMN04244553_3854 | Not Available | Positive | 3980357 - 3981544 | 44004.4 |
| menaquinol-cytochrome c reductase cytochrome b subunit precursor | SAMN04244553_3855 | Not Available | Positive | 3981541 - 3983163 | 59979.4 |
| protein of unknown function | SAMN04244553_3856 | Not Available | Negative | 3983243 - 3983785 | 20803.6 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN04244553_3857 | Not Available | Positive | 3983913 - 3985301 | 50994.8 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_3858 | Not Available | Negative | 3985474 - 3985950 | 17622.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_3859 | Not Available | Positive | 3986133 - 3986966 | 28634.4 |
| serine/threonine protein kinase | SAMN04244553_3860 | Not Available | Negative | 3987013 - 3988986 | 69164.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

