Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome association toxin past (rata) of the ratab toxin-antitoxin module | SAMN04244553_3841 | Not Available | Negative | 3968428 - 3968865 | 16223.5 |
| hypothetical protein | SAMN04244553_3842 | Not Available | Negative | 3969109 - 3969492 | 13929.6 |
| phosphatidylinositol alpha-1,6-mannosyltransferase | SAMN04244553_3843 | Not Available | Negative | 3969522 - 3970649 | 40507.9 |
| hypothetical protein | SAMN04244553_3844 | Not Available | Negative | 3970713 - 3971681 | 34334.0 |
| nlpc/p60 family protein | SAMN04244553_3845 | Not Available | Negative | 3971721 - 3972722 | 35069.1 |
| cell wall-associated hydrolase, nlpc family | SAMN04244553_3846 | Not Available | Negative | 3973000 - 3973581 | 19337.1 |
| dna polymerase-3 subunit epsilon | SAMN04244553_3847 | Not Available | Positive | 3974177 - 3976009 | 65069.9 |
| asnc family protein | SAMN04244553_3848 | Not Available | Positive | 3976111 - 3976416 | 10946.9 |
| hypothetical protein | SAMN04244553_3849 | Not Available | Negative | 3976421 - 3976699 | 9430.13 |
| anthranilate phosphoribosyltransferase | SAMN04244553_3850 | Not Available | Negative | 3976921 - 3977982 | 35812.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

