Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase e2 component | SAMN04244553_3811 | Not Available | Negative | 3932249 - 3934030 | 60111.8 |
| hypothetical protein | SAMN04244553_3812 | Not Available | Positive | 3934290 - 3934652 | 13697.3 |
| leucyl aminopeptidase | SAMN04244553_3813 | Not Available | Negative | 3935820 - 3937295 | 50917.6 |
| transcriptional regulator, tetr family | SAMN04244553_3814 | Not Available | Negative | 3937341 - 3938009 | 24350.4 |
| acetyltransferase (gnat) domain-containing protein | SAMN04244553_3815 | Not Available | Positive | 3938224 - 3938835 | 22344.3 |
| hypothetical protein | SAMN04244553_3816 | Not Available | Positive | 3938924 - 3939736 | 29764.3 |
| aminomethyltransferase | SAMN04244553_3817 | Not Available | Positive | 3939807 - 3940907 | 39056.3 |
| branched chain amino acid aminotransferase apoenzyme | SAMN04244553_3818 | Not Available | Positive | 3941604 - 3942704 | 39475.0 |
| pqq-like domain-containing protein | SAMN04244553_3819 | Not Available | Positive | 3942776 - 3944134 | 47865.7 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04244553_3820 | Not Available | Negative | 3944484 - 3945206 | 26233.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

