Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_3801 | Not Available | Negative | 3920068 - 3920427 | 12463.4 |
| hypothetical protein | SAMN04244553_3802 | Not Available | Negative | 3920460 - 3920873 | 14902.9 |
| n-6 dna methylase | SAMN04244553_3803 | Not Available | Positive | 3921034 - 3923028 | 70703.7 |
| hypothetical protein | SAMN04244553_3804 | Not Available | Positive | 3923025 - 3923663 | 22247.6 |
| serine/threonine protein kinase | SAMN04244553_3805 | Not Available | Positive | 3923705 - 3925132 | 52163.5 |
| hypothetical protein | SAMN04244553_3806 | Not Available | Positive | 3925756 - 3927615 | 69712.5 |
| lipoic acid synthetase | SAMN04244553_3807 | Not Available | Negative | 3927909 - 3928949 | 38418.6 |
| biotin/lipoate a/b protein ligase family protein | SAMN04244553_3808 | Not Available | Negative | 3928946 - 3930031 | 38402.2 |
| phosphinothricin acetyltransferase | SAMN04244553_3809 | Not Available | Negative | 3930411 - 3930935 | 19279.9 |
| hypothetical protein | SAMN04244553_3810 | Not Available | Negative | 3931320 - 3932228 | 31691.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

