Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN04244553_3791 | Not Available | Negative | 3898899 - 3900047 | 42583.6 |
| hypothetical protein | SAMN04244553_3792 | Not Available | Negative | 3900044 - 3900724 | 24722.8 |
| hypothetical protein | SAMN04244553_3793 | Not Available | Positive | 3900902 - 3902302 | 50308.7 |
| phosphotransferase enzyme family protein | SAMN04244553_3794 | Not Available | Positive | 3902299 - 3903189 | 32859.2 |
| pglz domain-containing protein | SAMN04244553_3795 | Not Available | Negative | 3903343 - 3906162 | 101569.0 |
| hypothetical protein | SAMN04244553_3796 | Not Available | Negative | 3906159 - 3910064 | 142365.0 |
| hypothetical protein | SAMN04244553_3797 | Not Available | Negative | 3910064 - 3913702 | 137296.0 |
| serine/threonine protein kinase | SAMN04244553_3798 | Not Available | Negative | 3913699 - 3918177 | 164068.0 |
| dgqhr domain-containing protein | SAMN04244553_3799 | Not Available | Negative | 3918453 - 3919667 | 44595.1 |
| hypothetical protein | SAMN04244553_3800 | Not Available | Negative | 3919725 - 3920042 | 11316.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

