Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenocysteine lyase/cysteine desulfurase | SAMN04244553_0469 | Not Available | Negative | 274945 - 276003 | 36997.2 |
| metallo-beta-lactamase superfamily protein | SAMN04244553_0470 | Not Available | Negative | 276166 - 276801 | 22813.6 |
| aaa atpase domain-containing protein | SAMN04244553_0471 | Not Available | Negative | 276859 - 279942 | 111008.0 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN04244553_0472 | Not Available | Negative | 280005 - 281096 | 36897.8 |
| snoal-like domain-containing protein | SAMN04244553_0473 | Not Available | Negative | 281213 - 281689 | 17734.8 |
| dna-binding transcriptional regulator, merr family | SAMN04244553_0476 | Not Available | Positive | 282538 - 283524 | 35232.8 |
| hypothetical protein | SAMN04244553_0477 | Not Available | Positive | 283686 - 284318 | 22124.0 |
| o-methyltransferase | SAMN04244553_0478 | Not Available | Negative | 284183 - 285331 | 40992.8 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04244553_0479 | Not Available | Negative | 285388 - 286797 | 49932.1 |
| cupin domain-containing protein | SAMN04244553_0480 | Not Available | Positive | 286862 - 287185 | 12162.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

