Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ca-activated chloride channel family protein | SAMN04244553_3770 | Not Available | Positive | 3877833 - 3879683 | 63982.8 |
| hypothetical protein | SAMN04244553_3771 | Not Available | Negative | 3879747 - 3880196 | 15580.4 |
| hypothetical protein | SAMN04244553_3772 | Not Available | Positive | 3880473 - 3881936 | 52613.0 |
| hypothetical protein | SAMN04244553_3773 | Not Available | Negative | 3882054 - 3882560 | 18512.0 |
| hypothetical protein | SAMN04244553_3775 | Not Available | Positive | 3883252 - 3883785 | 19526.9 |
| mcrbc 5-methylcytosine restriction system component | SAMN04244553_3776 | Not Available | Negative | 3883832 - 3885094 | 46498.8 |
| 5-methylcytosine-specific restriction enzyme b | SAMN04244553_3777 | Not Available | Negative | 3885087 - 3887159 | 76168.2 |
| aaa domain-containing protein | SAMN04244553_3778 | Not Available | Negative | 3887182 - 3888480 | 46775.3 |
| hypothetical protein | SAMN04244553_3779 | Not Available | Negative | 3888480 - 3889964 | 53134.2 |
| hypothetical protein | SAMN04244553_3780 | Not Available | Negative | 3889961 - 3891049 | 38602.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

