Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04244553_3760 | Not Available | Positive | 3862147 - 3866676 | 162016.0 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN04244553_3761 | Not Available | Positive | 3866676 - 3869063 | 85339.5 |
| stas domain-containing protein | SAMN04244553_3762 | Not Available | Positive | 3869195 - 3869551 | 12692.1 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN04244553_3763 | Not Available | Positive | 3869548 - 3870477 | 33061.2 |
| hypothetical protein | SAMN04244553_3764 | Not Available | Negative | 3870561 - 3871265 | 25634.2 |
| l-glutamine synthetase | SAMN04244553_3765 | Not Available | Negative | 3871447 - 3872883 | 53909.2 |
| rdd family protein | SAMN04244553_3766 | Not Available | Positive | 3873274 - 3873726 | 15822.5 |
| dihydrofolate reductase | SAMN04244553_3767 | Not Available | Negative | 3873848 - 3874399 | 20910.0 |
| protein of unknown function | SAMN04244553_3768 | Not Available | Negative | 3874563 - 3875339 | 28092.0 |
| elongation factor g | SAMN04244553_3769 | Not Available | Negative | 3875363 - 3877564 | 77421.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

