Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-ammonia-ligase adenylyltransferase | SAMN04244553_3750 | Not Available | Positive | 3849497 - 3852508 | 109206.0 |
| hypothetical protein | SAMN04244553_3751 | Not Available | Negative | 3852514 - 3852786 | 9800.58 |
| uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamily | SAMN04244553_3752 | Not Available | Positive | 3852849 - 3853838 | 35962.6 |
| predicted metalloprotease | SAMN04244553_3753 | Not Available | Positive | 3854097 - 3855551 | 51576.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN04244553_3754 | Not Available | Negative | 3855573 - 3856040 | 16538.6 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN04244553_3755 | Not Available | Negative | 3856050 - 3856889 | 29845.9 |
| carboxypeptidase pm20d1 | SAMN04244553_3756 | Not Available | Negative | 3856886 - 3858262 | 49708.7 |
| hypothetical protein | SAMN04244553_3757 | Not Available | Negative | 3858347 - 3859981 | 58821.3 |
| hypothetical protein | SAMN04244553_3758 | Not Available | Positive | 3860199 - 3860651 | 16753.1 |
| protein-tyrosine phosphatase | SAMN04244553_3759 | Not Available | Negative | 3860702 - 3861655 | 34518.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

