Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | SAMN04244553_3739 | Not Available | Negative | 3838600 - 3839487 | 32236.8 |
| hypothetical protein | SAMN04244553_3741 | Not Available | Negative | 3840086 - 3840493 | 13820.1 |
| hypothetical protein | SAMN04244553_3742 | Not Available | Positive | 3840889 - 3841221 | 10988.1 |
| rnb domain-containing protein | SAMN04244553_3743 | Not Available | Positive | 3841233 - 3842669 | 50287.9 |
| chad domain-containing protein | SAMN04244553_3744 | Not Available | Negative | 3842687 - 3843556 | 31860.6 |
| proline iminopeptidase | SAMN04244553_3745 | Not Available | Negative | 3843560 - 3844522 | 35356.6 |
| hypothetical protein | SAMN04244553_3746 | Not Available | Negative | 3844522 - 3844968 | 15167.0 |
| ketopantoate hydroxymethyltransferase | SAMN04244553_3747 | Not Available | Negative | 3845112 - 3845969 | 30052.8 |
| alpha/beta hydrolase fold | SAMN04244553_3748 | Not Available | Positive | 3846282 - 3847814 | 54426.8 |
| l-glutamine synthetase | SAMN04244553_3749 | Not Available | Positive | 3848103 - 3849461 | 50541.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

