Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-phosphate synthase | SAMN04244553_3719 | Not Available | Positive | 3821894 - 3822889 | 34623.7 |
| dna-binding transcriptional regulator, fadr family | SAMN04244553_3720 | Not Available | Positive | 3823035 - 3823748 | 25687.6 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04244553_3721 | Not Available | Positive | 3823752 - 3824579 | 32034.4 |
| cytochrome oxidase assembly protein shyy1 | SAMN04244553_3722 | Not Available | Negative | 3824626 - 3825519 | 32173.2 |
| protein-tyrosine phosphatase | SAMN04244553_3723 | Not Available | Negative | 3825519 - 3826022 | 17859.3 |
| histidinol-phosphate aminotransferase | SAMN04244553_3724 | Not Available | Positive | 3826067 - 3827134 | 37846.5 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN04244553_3725 | Not Available | Positive | 3827410 - 3828534 | 38928.8 |
| hypothetical protein | SAMN04244553_3726 | Not Available | Positive | 3828589 - 3829233 | 23494.4 |
| espg family protein | SAMN04244553_3727 | Not Available | Negative | 3829247 - 3830011 | 29595.4 |
| hypothetical protein | SAMN04244553_3728 | Not Available | Negative | 3830064 - 3831422 | 47584.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

