Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 265867 - 265983 | 18.01 |
| haloalkane dehalogenase | SAMN04244553_0459 | Not Available | Negative | 266351 - 267211 | 31980.9 |
| dna-binding transcriptional regulator, iclr family | SAMN04244553_0460 | Not Available | Negative | 267364 - 268254 | 31238.6 |
| 7-alpha-hydroxysteroid dehydrogenase | SAMN04244553_0461 | Not Available | Positive | 268342 - 269133 | 26953.6 |
| hypothetical protein | SAMN04244553_0462 | Not Available | Positive | 269135 - 270205 | 37809.5 |
| hypothetical protein | SAMN04244553_0463 | Not Available | Negative | 270274 - 270483 | 7796.2 |
| hypothetical protein | SAMN04244553_0465 | Not Available | Positive | 271278 - 272300 | 36870.6 |
| 2'-5' rna ligase superfamily protein | SAMN04244553_0466 | Not Available | Positive | 272293 - 272898 | 22407.8 |
| hypothetical protein | SAMN04244553_0467 | Not Available | Positive | 272852 - 273553 | 26364.8 |
| gdsl-like lipase/acylhydrolase family protein | SAMN04244553_0468 | Not Available | Negative | 273708 - 274706 | 33629.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

