Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin | SAMN04244553_3667 | Not Available | Positive | 3771709 - 3772374 | 23105.0 |
| hypothetical protein | SAMN04244553_3668 | Not Available | Negative | 3772427 - 3772624 | 6878.93 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04244553_3669 | Not Available | Positive | 3772917 - 3773384 | 17025.2 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_3670 | Not Available | Negative | 3773464 - 3774882 | 49032.3 |
| transcriptional regulator, tetr family | SAMN04244553_3671 | Not Available | Positive | 3774977 - 3775720 | 27339.6 |
| stress response protein scp2 | SAMN04244553_3672 | Not Available | Positive | 3775869 - 3777254 | 49109.6 |
| hypothetical protein | SAMN04244553_3673 | Not Available | Negative | 3777282 - 3777557 | 9454.72 |
| hypothetical protein | SAMN04244553_3674 | Not Available | Negative | 3777801 - 3778007 | 7432.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_3675 | Not Available | Negative | 3778441 - 3779262 | 29051.7 |
| hypothetical protein | SAMN04244553_3677 | Not Available | Positive | 3779796 - 3780074 | 9576.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

