Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding enzyme | SAMN04244553_3656 | Not Available | Positive | 3760051 - 3760977 | 32734.1 |
| acetyl esterase/lipase | SAMN04244553_3657 | Not Available | Negative | 3761136 - 3762056 | 32631.5 |
| hypothetical protein | SAMN04244553_3659 | Not Available | Positive | 3762539 - 3763009 | 17623.0 |
| secretory lipase | SAMN04244553_3660 | Not Available | Negative | 3763068 - 3764483 | 49132.7 |
| transcriptional regulator, tetr family | SAMN04244553_3661 | Not Available | Positive | 3764625 - 3765257 | 23665.4 |
| hypothetical protein | SAMN04244553_3662 | Not Available | Negative | 3765285 - 3765554 | 10317.0 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN04244553_3663 | Not Available | Positive | 3765753 - 3766829 | 37699.7 |
| hypothetical protein | SAMN04244553_3664 | Not Available | Negative | 3766954 - 3767184 | 8399.09 |
| hypothetical protein | SAMN04244553_3665 | Not Available | Positive | 3767747 - 3769663 | 69895.8 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN04244553_3666 | Not Available | Positive | 3769688 - 3771283 | 55676.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

