Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN04244553_3642 | Not Available | Positive | 3747811 - 3749583 | 64801.9 |
| hypothetical protein | SAMN04244553_3643 | Not Available | Negative | 3749576 - 3750103 | 19445.2 |
| nadph2:quinone reductase | SAMN04244553_3644 | Not Available | Positive | 3750601 - 3751596 | 33917.3 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN04244553_3645 | Not Available | Negative | 3751804 - 3752235 | 15973.3 |
| Trna-met | Not Available | Not Available | Positive | 3752411 - 3752487 | Not Available |
| hypothetical protein | SAMN04244553_3649 | Not Available | Positive | 3754182 - 3754970 | 29484.9 |
| excreted virulence factor espc, type vii esx diderm | SAMN04244553_3650 | Not Available | Positive | 3754970 - 3755281 | 11156.3 |
| hypothetical protein | SAMN04244553_3651 | Not Available | Positive | 3755278 - 3756168 | 32106.9 |
| hypothetical protein | SAMN04244553_3652 | Not Available | Positive | 3756150 - 3756719 | 20372.1 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN04244553_3655 | Not Available | Negative | 3758451 - 3759737 | 47194.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

