Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN04244553_3632 | Not Available | Positive | 3738679 - 3739026 | 12781.4 |
| hypothetical protein | SAMN04244553_3633 | Not Available | Positive | 3739338 - 3739649 | 10995.0 |
| protein of unknown function | SAMN04244553_3634 | Not Available | Positive | 3740125 - 3740598 | 17498.2 |
| lysr family transcriptional regulator, chromosome initiation inhibitor | SAMN04244553_3635 | Not Available | Negative | 3740600 - 3741484 | 32023.3 |
| l-lysine exporter family protein lyse/argo | SAMN04244553_3636 | Not Available | Positive | 3741553 - 3742182 | 21196.2 |
| 3alpha(or 20beta)-hydroxysteroid dehydrogenase | SAMN04244553_3637 | Not Available | Negative | 3742202 - 3742942 | 25829.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_3638 | Not Available | Positive | 3743121 - 3744008 | 32152.7 |
| acyltransferase, ws/dgat/mgat | SAMN04244553_3639 | Not Available | Negative | 3744101 - 3745498 | 51040.5 |
| hypothetical protein | SAMN04244553_3640 | Not Available | Positive | 3745775 - 3746677 | 33522.6 |
| ferredoxin-nadp reductase | SAMN04244553_3641 | Not Available | Positive | 3746674 - 3747780 | 40411.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

