Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04244553_3553 | Not Available | Negative | 3672559 - 3673428 | 29861.2 |
| dna-binding transcriptional regulator, pucr family | SAMN04244553_3554 | Not Available | Positive | 3673718 - 3674965 | 44688.6 |
| acetyl esterase/lipase | SAMN04244553_3555 | Not Available | Positive | 3675140 - 3676138 | 35921.4 |
| hypothetical protein | SAMN04244553_3556 | Not Available | Positive | 3676193 - 3676408 | 7936.65 |
| hypothetical protein | SAMN04244553_3557 | Not Available | Positive | 3676417 - 3677400 | 35042.1 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN04244553_3558 | Not Available | Positive | 3677613 - 3678233 | 22581.0 |
| dgtpase | SAMN04244553_3559 | Not Available | Positive | 3678239 - 3679498 | 46132.7 |
| fic family protein | SAMN04244553_3560 | Not Available | Positive | 3679632 - 3680672 | 39322.3 |
| dna primase | SAMN04244553_3561 | Not Available | Positive | 3680722 - 3682632 | 69694.2 |
| hypothetical protein | SAMN04244553_3562 | Not Available | Negative | 3682935 - 3683180 | 8953.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

