Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc uptake regulator, fur family | SAMN04244553_3533 | Not Available | Negative | 3652159 - 3652587 | 15634.3 |
| transcriptional regulator, arsr family | SAMN04244553_3534 | Not Available | Negative | 3652591 - 3652941 | 12397.9 |
| hypothetical protein | SAMN04244553_3535 | Not Available | Negative | 3653021 - 3654004 | 35930.6 |
| glycyl-trna synthetase | SAMN04244553_3536 | Not Available | Positive | 3654393 - 3655778 | 52743.0 |
| ribbon-helix-helix protein, copg family | SAMN04244553_3537 | Not Available | Positive | 3655843 - 3656121 | 10707.5 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN04244553_3538 | Not Available | Positive | 3656125 - 3656610 | 17779.2 |
| thiaminase (transcriptional activator tena) | SAMN04244553_3539 | Not Available | Negative | 3656723 - 3657343 | 22705.8 |
| phthiocerol/phthiodiolone dimycocerosyl transferase c-terminus | SAMN04244553_3540 | Not Available | Positive | 3657431 - 3658999 | 55527.3 |
| dmso/tmao reductase yedyz, molybdopterin-dependent catalytic subunit | SAMN04244553_3541 | Not Available | Positive | 3659207 - 3660646 | 49849.8 |
| dna-binding transcriptional regulator, merr family | SAMN04244553_3542 | Not Available | Negative | 3660754 - 3661572 | 30166.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

