Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-inducible transcription repressor hrca | SAMN04244553_3513 | Not Available | Positive | 3630581 - 3631612 | 36929.7 |
| molecular chaperone dnaj | SAMN04244553_3514 | Not Available | Positive | 3631753 - 3632910 | 40599.4 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN04244553_3515 | Not Available | Positive | 3632915 - 3633655 | 25842.1 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_3516 | Not Available | Negative | 3633663 - 3634886 | 41246.8 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_3517 | Not Available | Positive | 3634986 - 3635918 | 33647.6 |
| phosphate starvation-inducible protein phoh | SAMN04244553_3518 | Not Available | Positive | 3636009 - 3637112 | 39943.9 |
| probable rrna maturation factor | SAMN04244553_3519 | Not Available | Positive | 3637325 - 3637879 | 20192.1 |
| hemolysin, contains cbs domains | SAMN04244553_3520 | Not Available | Positive | 3637876 - 3639228 | 48390.9 |
| hypothetical protein | SAMN04244553_3521 | Not Available | Positive | 3639221 - 3639580 | 11836.8 |
| gtp-binding protein era | SAMN04244553_3522 | Not Available | Positive | 3639573 - 3640490 | 33505.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

