Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dynamin family protein | SAMN04244553_3483 | Not Available | Positive | 3595952 - 3597742 | 64963.4 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN04244553_3484 | Not Available | Negative | 3597779 - 3599767 | 74435.7 |
| hypothetical protein | SAMN04244553_3485 | Not Available | Positive | 3599851 - 3600126 | 9965.22 |
| zn-dependent protease with chaperone function | SAMN04244553_3486 | Not Available | Negative | 3600335 - 3601396 | 39509.3 |
| sulfate transport system substrate-binding protein | SAMN04244553_3487 | Not Available | Positive | 3601769 - 3602815 | 36905.4 |
| sulfate transport system permease protein | SAMN04244553_3488 | Not Available | Positive | 3602852 - 3603745 | 31413.6 |
| sulfate transport system permease protein | SAMN04244553_3489 | Not Available | Positive | 3603742 - 3604548 | 28886.4 |
| sulfate transport system atp-binding protein | SAMN04244553_3490 | Not Available | Positive | 3604545 - 3605540 | 36198.3 |
| molecular chaperone hsca | SAMN04244553_3491 | Not Available | Positive | 3606015 - 3607118 | 37457.0 |
| p-aminobenzoate n-oxygenase aurf | SAMN04244553_3492 | Not Available | Positive | 3607261 - 3608274 | 38267.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

