Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, delta subunit | SAMN04244553_3473 | Not Available | Positive | 3584147 - 3585118 | 33095.5 |
| transcriptional attenuator, lytr family | SAMN04244553_3474 | Not Available | Positive | 3585297 - 3586760 | 51686.9 |
| predicted oxidoreductase | SAMN04244553_3475 | Not Available | Negative | 3586842 - 3587912 | 39069.6 |
| helix-turn-helix domain-containing protein | SAMN04244553_3476 | Not Available | Positive | 3588035 - 3588910 | 32680.2 |
| hypothetical protein | SAMN04244553_3477 | Not Available | Negative | 3588959 - 3589237 | 10262.8 |
| ssu ribosomal protein s20p | SAMN04244553_3478 | Not Available | Negative | 3589369 - 3589632 | 9483.44 |
| aquaporin z | SAMN04244553_3479 | Not Available | Positive | 3590042 - 3590830 | 27041.6 |
| pemk-like, mazf-like toxin of type ii toxin-antitoxin system | SAMN04244553_3480 | Not Available | Negative | 3590923 - 3591474 | 20560.6 |
| gtp-binding protein lepa | SAMN04244553_3481 | Not Available | Positive | 3591586 - 3593436 | 68459.5 |
| hypothetical protein | SAMN04244553_3482 | Not Available | Positive | 3593665 - 3595881 | 72882.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

