Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | SAMN04244553_3463 | Not Available | Positive | 3572917 - 3573558 | 23754.2 |
| ribosome-associated protein | SAMN04244553_3464 | Not Available | Positive | 3573592 - 3573969 | 13788.1 |
| glucosyl-3-phosphoglycerate phosphatase (pgm family) | SAMN04244553_3465 | Not Available | Positive | 3573966 - 3574625 | 24117.7 |
| hypothetical protein | SAMN04244553_3466 | Not Available | Positive | 3574615 - 3576207 | 54513.1 |
| edd domain protein, degv family | SAMN04244553_3467 | Not Available | Positive | 3576211 - 3577053 | 28971.8 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04244553_3468 | Not Available | Negative | 3577064 - 3577972 | 32105.3 |
| competence protein comea | SAMN04244553_3469 | Not Available | Positive | 3578567 - 3579211 | 21207.4 |
| competence protein comec | SAMN04244553_3470 | Not Available | Positive | 3579208 - 3581421 | 76556.8 |
| competence protein comec | SAMN04244553_3471 | Not Available | Positive | 3582096 - 3582798 | 24209.9 |
| hypothetical protein | SAMN04244553_3472 | Not Available | Positive | 3582979 - 3583836 | 31828.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

