Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubia prenyltransferase family protein | SAMN04244553_3432 | Not Available | Positive | 3539169 - 3540116 | 33940.8 |
| hypothetical protein | SAMN04244553_3433 | Not Available | Negative | 3540121 - 3540291 | 6550.42 |
| dimerisation domain-containing protein | SAMN04244553_3434 | Not Available | Negative | 3540320 - 3541420 | 40203.4 |
| cytochrome p450 | SAMN04244553_3435 | Not Available | Negative | 3541532 - 3544096 | 92672.3 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN04244553_3436 | Not Available | Positive | 3544165 - 3545445 | 45848.1 |
| abc-2 type transport system permease protein | SAMN04244553_3437 | Not Available | Positive | 3545534 - 3546253 | 25252.4 |
| merr hth family regulatory protein | SAMN04244553_3438 | Not Available | Negative | 3546255 - 3547016 | 28022.4 |
| hypothetical protein | SAMN04244553_3440 | Not Available | Negative | 3548732 - 3549661 | 35482.3 |
| short-chain dehydrogenase | SAMN04244553_3441 | Not Available | Negative | 3549663 - 3550562 | 31941.6 |
| acetyl esterase/lipase | SAMN04244553_3442 | Not Available | Negative | 3550564 - 3551550 | 34807.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

