Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylulokinase | SAMN04244553_0439 | Not Available | Negative | 242545 - 244023 | 51717.3 |
| l-fucose isomerase | SAMN04244553_0440 | Not Available | Negative | 244049 - 245467 | 51835.3 |
| beta-fructofuranosidase | SAMN04244553_0441 | Not Available | Negative | 245589 - 246470 | 32828.4 |
| tyrosine phosphatase family c-terminal region | SAMN04244553_0442 | Not Available | Negative | 246561 - 247325 | 27417.7 |
| pyruvate, orthophosphate dikinase | SAMN04244553_0443 | Not Available | Negative | 247327 - 249576 | 79453.8 |
| excinuclease abc, a subunit | SAMN04244553_0444 | Not Available | Negative | 249914 - 252202 | 81918.8 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04244553_0445 | Not Available | Positive | 252257 - 253225 | 35629.7 |
| transcriptional regulator, tetr family | SAMN04244553_0446 | Not Available | Positive | 253314 - 253985 | 24848.9 |
| cslrea domain-containing protein | SAMN04244553_0447 | Not Available | Negative | 253982 - 255100 | 37867.0 |
| hypothetical protein | SAMN04244553_0448 | Not Available | Negative | 255270 - 255686 | 15726.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

