Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | SAMN04244553_3392 | Not Available | Positive | 3492290 - 3493651 | 49196.4 |
| atp-dependent clp protease, protease subunit | SAMN04244553_3393 | Not Available | Positive | 3493871 - 3494458 | 20968.1 |
| atp-dependent clp protease proteolytic subunit clpp | SAMN04244553_3394 | Not Available | Positive | 3494531 - 3495196 | 24135.9 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04244553_3395 | Not Available | Positive | 3495637 - 3496917 | 46724.3 |
| anti-anti-sigma factor | SAMN04244553_3396 | Not Available | Positive | 3497148 - 3497552 | 14296.2 |
| steroid delta-isomerase | SAMN04244553_3397 | Not Available | Negative | 3497614 - 3497991 | 14054.5 |
| dihydrofolate reductase | SAMN04244553_3398 | Not Available | Negative | 3498287 - 3498898 | 21855.7 |
| hypothetical protein | SAMN04244553_3399 | Not Available | Positive | 3499080 - 3499394 | 10927.6 |
| hypothetical protein | SAMN04244553_3400 | Not Available | Negative | 3499534 - 3500067 | 19228.6 |
| fdhd protein | SAMN04244553_3401 | Not Available | Negative | 3500186 - 3501022 | 29361.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

