Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_3382 | Not Available | Positive | 3479972 - 3480442 | 17218.6 |
| espg family protein | SAMN04244553_3383 | Not Available | Negative | 3480470 - 3481189 | 26537.7 |
| hypothetical protein | SAMN04244553_3384 | Not Available | Negative | 3481186 - 3481770 | 20621.7 |
| hypothetical protein | SAMN04244553_3385 | Not Available | Negative | 3481767 - 3482135 | 12804.1 |
| hypothetical protein | SAMN04244553_3386 | Not Available | Positive | 3482351 - 3482743 | 14332.1 |
| cubico group peptidase, beta-lactamase class c family | SAMN04244553_3387 | Not Available | Negative | 3482748 - 3483992 | 44754.5 |
| polynucleotide kinase-phosphatase | SAMN04244553_3388 | Not Available | Negative | 3484529 - 3487207 | 97329.6 |
| 3' terminal rna ribose 2'-o-methyltransferase hen1 | SAMN04244553_3389 | Not Available | Negative | 3487207 - 3488844 | 58770.3 |
| xylulose-5-phosphate/fructose-6-phosphate phosphoketolase | SAMN04244553_3390 | Not Available | Negative | 3488978 - 3491446 | 91062.1 |
| peptidylprolyl isomerase | SAMN04244553_3391 | Not Available | Positive | 3491580 - 3492140 | 18969.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

