Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | SAMN04244553_3362 | Not Available | Positive | 3461591 - 3463177 | 58066.5 |
| hypothetical protein | SAMN04244553_3363 | Not Available | Positive | 3463415 - 3463747 | 11806.2 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN04244553_3364 | Not Available | Positive | 3463734 - 3464198 | 16065.9 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04244553_3365 | Not Available | Positive | 3464327 - 3465130 | 28648.9 |
| hypothetical protein | SAMN04244553_3366 | Not Available | Positive | 3465212 - 3465628 | 14953.2 |
| hypothetical protein | SAMN04244553_3367 | Not Available | Positive | 3465625 - 3465825 | 7078.01 |
| aminopeptidase n | SAMN04244553_3368 | Not Available | Negative | 3465917 - 3468505 | 93946.8 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN04244553_3369 | Not Available | Positive | 3468973 - 3469803 | 30597.9 |
| predicted ntp pyrophosphohydrolase, nudix family | SAMN04244553_3370 | Not Available | Negative | 3469825 - 3470349 | 19364.6 |
| rna polymerase sigma factor, sigma-70 family | SAMN04244553_3371 | Not Available | Negative | 3470428 - 3471660 | 44678.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

