Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN04244553_3331 | Not Available | Negative | 3426107 - 3427099 | 36886.5 |
| abc-2 type transport system permease protein | SAMN04244553_3332 | Not Available | Negative | 3427102 - 3427932 | 29937.2 |
| abc-2 type transport system permease protein | SAMN04244553_3333 | Not Available | Negative | 3427925 - 3428779 | 30775.5 |
| diaminobutyrate-2-oxoglutarate transaminase | SAMN04244553_3334 | Not Available | Positive | 3428927 - 3430183 | 44667.4 |
| formiminoglutamase | SAMN04244553_3335 | Not Available | Negative | 3431140 - 3432093 | 33578.9 |
| imidazolonepropionase | SAMN04244553_3336 | Not Available | Negative | 3432090 - 3433283 | 41219.5 |
| nudix domain-containing protein | SAMN04244553_3337 | Not Available | Positive | 3434075 - 3434473 | 14588.5 |
| membrane-bound lytic murein transglycosylase b | SAMN04244553_3338 | Not Available | Positive | 3434735 - 3436174 | 48418.5 |
| abc-2 type transport system atp-binding protein | SAMN04244553_3340 | Not Available | Positive | 3436537 - 3437415 | 31617.1 |
| abc-2 type transport system permease protein | SAMN04244553_3341 | Not Available | Positive | 3437489 - 3438676 | 42196.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

