Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_3320 | Not Available | Negative | 3416211 - 3416858 | 23739.6 |
| ferredoxin-nadp reductase | SAMN04244553_3321 | Not Available | Positive | 3417028 - 3418086 | 38794.2 |
| linoleoyl-coa desaturase | SAMN04244553_3322 | Not Available | Positive | 3418108 - 3419256 | 43477.4 |
| hypothetical protein | SAMN04244553_3323 | Not Available | Positive | 3419257 - 3419562 | 10921.6 |
| protein of unknown function | SAMN04244553_3324 | Not Available | Negative | 3419563 - 3420093 | 19399.9 |
| hypothetical protein | SAMN04244553_3325 | Not Available | Positive | 3420481 - 3420807 | 12088.4 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_3326 | Not Available | Negative | 3421099 - 3422352 | 43200.7 |
| cysteine synthase a | SAMN04244553_3327 | Not Available | Negative | 3422349 - 3423707 | 48460.5 |
| hypothetical protein | SAMN04244553_3328 | Not Available | Negative | 3423814 - 3424203 | 13262.2 |
| protein of unknown function | SAMN04244553_3330 | Not Available | Positive | 3425376 - 3426065 | 26321.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

