Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_0429 | Not Available | Negative | 233148 - 233924 | 26224.7 |
| hypothetical protein | SAMN04244553_0430 | Not Available | Negative | 234135 - 234800 | 21869.8 |
| esterase, phb depolymerase family | SAMN04244553_0431 | Not Available | Positive | 235163 - 236158 | 35477.6 |
| predicted acetyltransferase | SAMN04244553_0432 | Not Available | Negative | 236162 - 236671 | 18511.0 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN04244553_0433 | Not Available | Negative | 236693 - 237952 | 45135.9 |
| xylulokinase | SAMN04244553_0434 | Not Available | Negative | 238088 - 239485 | 48090.1 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN04244553_0435 | Not Available | Negative | 239482 - 240477 | 34273.1 |
| hypothetical protein | SAMN04244553_0436 | Not Available | Positive | 240711 - 241025 | 11284.2 |
| protein of unknown function | SAMN04244553_0437 | Not Available | Negative | 241016 - 242032 | 37433.9 |
| thioredoxin 1 | SAMN04244553_0438 | Not Available | Negative | 242029 - 242490 | 16590.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

