Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_3300 | Not Available | Positive | 3398557 - 3398778 | 8033.88 |
| excalibur calcium-binding domain-containing protein | SAMN04244553_3301 | Not Available | Negative | 3398847 - 3399143 | 9188.61 |
| hypothetical protein | SAMN04244553_3302 | Not Available | Negative | 3399278 - 3400255 | 34946.6 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_3303 | Not Available | Positive | 3400335 - 3400799 | 17004.4 |
| hypothetical protein | SAMN04244553_3304 | Not Available | Negative | 3400803 - 3401117 | 11662.7 |
| transglycosylase slt domain-containing protein | SAMN04244553_3305 | Not Available | Negative | 3401194 - 3401844 | 22119.1 |
| Trna-lys | Not Available | Not Available | Positive | 3402539 - 3402611 | Not Available |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN04244553_3307 | Not Available | Positive | 3402980 - 3404137 | 41159.1 |
| hypothetical protein | SAMN04244553_3308 | Not Available | Negative | 3404208 - 3404558 | 10893.7 |
| Trna-his | Not Available | Not Available | Positive | 3404703 - 3404778 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

