Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, arsr family | SAMN04244553_3270 | Not Available | Negative | 3360431 - 3360781 | 12652.1 |
| cobalt/nickel transport system permease protein | SAMN04244553_3271 | Not Available | Positive | 3360896 - 3361981 | 36620.8 |
| cobalt/nickel transport system permease protein | SAMN04244553_3272 | Not Available | Positive | 3361974 - 3362729 | 27069.6 |
| cobalt/nickel transport system atp-binding protein | SAMN04244553_3273 | Not Available | Positive | 3362726 - 3363445 | 25534.8 |
| hypothetical protein | SAMN04244553_3274 | Not Available | Negative | 3363483 - 3364484 | 35383.5 |
| transcriptional regulator, tetr family | SAMN04244553_3275 | Not Available | Positive | 3364762 - 3365400 | 23556.2 |
| acyl-coa dehydrogenase | SAMN04244553_3276 | Not Available | Positive | 3365624 - 3366865 | 45810.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_3277 | Not Available | Positive | 3366865 - 3367644 | 26721.6 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN04244553_3278 | Not Available | Positive | 3367637 - 3368674 | 37673.2 |
| nadph2:quinone reductase | SAMN04244553_3279 | Not Available | Positive | 3368767 - 3369750 | 34402.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

