Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | SAMN04244553_3260 | Not Available | Negative | 3335875 - 3336306 | 15583.8 |
| hypothetical protein | SAMN04244553_3261 | Not Available | Positive | 3336921 - 3337127 | 7342.8 |
| acetyltransferase (gnat) family protein | SAMN04244553_3262 | Not Available | Negative | 3337134 - 3337979 | 28765.5 |
| peptidyl-dipeptidase dcp | SAMN04244553_3263 | Not Available | Negative | 3338009 - 3340054 | 75217.7 |
| hypothetical protein | SAMN04244553_3264 | Not Available | Positive | 3340142 - 3340315 | 5935.75 |
| bile acid:na+ symporter, bass family | SAMN04244553_3265 | Not Available | Negative | 3340426 - 3341310 | 30769.4 |
| gmp synthase (glutamine-hydrolysing) | SAMN04244553_3266 | Not Available | Positive | 3341524 - 3342264 | 27390.6 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN04244553_3267 | Not Available | Positive | 3342703 - 3359061 | 581914.0 |
| hypothetical protein | SAMN04244553_3268 | Not Available | Negative | 3359111 - 3359359 | 8888.68 |
| glutamine amidotransferase | SAMN04244553_3269 | Not Available | Positive | 3359585 - 3360400 | 30314.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

