Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_3250 | Not Available | Negative | 3324387 - 3325814 | 49253.0 |
| hypothetical protein | SAMN04244553_3251 | Not Available | Positive | 3325976 - 3326245 | 9393.52 |
| 16s rrna (adenine(1408)-n(1))-methyltransferase | SAMN04244553_3252 | Not Available | Positive | 3326359 - 3326982 | 21009.2 |
| acyl-coa dehydrogenase | SAMN04244553_3253 | Not Available | Negative | 3326963 - 3328108 | 42120.4 |
| transcriptional regulator, tetr family | SAMN04244553_3254 | Not Available | Positive | 3328264 - 3328980 | 26406.2 |
| transcriptional regulator, paax family | SAMN04244553_3255 | Not Available | Negative | 3328992 - 3329744 | 27515.8 |
| putative acyl-coa dehydrogenase | SAMN04244553_3256 | Not Available | Positive | 3329856 - 3331484 | 58504.7 |
| enoyl-coa hydratase | SAMN04244553_3257 | Not Available | Positive | 3331513 - 3332544 | 37463.1 |
| hypothetical protein | SAMN04244553_3258 | Not Available | Negative | 3332549 - 3332761 | 7549.18 |
| luxr family transcriptional regulator, maltose regulon positive regulatory protein | SAMN04244553_3259 | Not Available | Negative | 3332863 - 3335505 | 93401.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

