Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN04244553_3239 | Not Available | Positive | 3310666 - 3311808 | 40906.5 |
| alpha/beta hydrolase family protein | SAMN04244553_3240 | Not Available | Negative | 3311852 - 3313018 | 39808.1 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN04244553_3241 | Not Available | Positive | 3313119 - 3314501 | 50123.2 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04244553_3242 | Not Available | Negative | 3314794 - 3316092 | 46449.7 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_3243 | Not Available | Positive | 3316433 - 3318955 | 88158.1 |
| rsbt co-antagonist protein rsbr | SAMN04244553_3244 | Not Available | Negative | 3318966 - 3319865 | 32711.3 |
| cytochrome b561 | SAMN04244553_3246 | Not Available | Negative | 3321234 - 3321788 | 20224.7 |
| catalase | SAMN04244553_3247 | Not Available | Negative | 3321794 - 3322867 | 37919.8 |
| alkylresorcinol/alkylpyrone synthase/polyketide synthase type iii | SAMN04244553_3248 | Not Available | Negative | 3322952 - 3323392 | 16107.4 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_3249 | Not Available | Positive | 3323905 - 3324375 | 17159.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

