Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_3219 | Not Available | Negative | 3290423 - 3290587 | 5644.84 |
| cgnr zinc finger domain-containing protein | SAMN04244553_3220 | Not Available | Positive | 3290613 - 3291113 | 18369.7 |
| hypothetical protein | SAMN04244553_3221 | Not Available | Negative | 3291124 - 3291552 | 15501.9 |
| transcriptional regulator, tetr family | SAMN04244553_3222 | Not Available | Negative | 3291906 - 3292562 | 23507.4 |
| cytochrome p450 | SAMN04244553_3223 | Not Available | Positive | 3292695 - 3294131 | 54179.5 |
| ferredoxin | SAMN04244553_3224 | Not Available | Positive | 3294170 - 3294322 | 5095.08 |
| uncharacterized conserved protein | SAMN04244553_3225 | Not Available | Positive | 3294389 - 3295816 | 51207.3 |
| acyl-coa dehydrogenase | SAMN04244553_3226 | Not Available | Positive | 3295890 - 3297014 | 39850.4 |
| alkyl sulfatase bds1, metallo-beta-lactamase superfamily | SAMN04244553_3227 | Not Available | Negative | 3297027 - 3299072 | 74274.4 |
| transcriptional regulator, tetr family | SAMN04244553_3228 | Not Available | Positive | 3299234 - 3299851 | 22497.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

