Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase | SAMN04244553_0419 | Not Available | Negative | 222810 - 223664 | 31020.4 |
| 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase | SAMN04244553_0420 | Not Available | Negative | 223667 - 224833 | 42624.3 |
| 3-oxo-5alpha-steroid 4-dehydrogenase | SAMN04244553_0421 | Not Available | Negative | 224975 - 226465 | 51634.9 |
| nad dependent epimerase/dehydratase family protein | SAMN04244553_0422 | Not Available | Positive | 226630 - 229053 | 84937.6 |
| protein-tyrosine phosphatase | SAMN04244553_0423 | Not Available | Positive | 229195 - 230118 | 33199.8 |
| hypothetical protein | SAMN04244553_0424 | Not Available | Positive | 230198 - 230476 | 9704.49 |
| hypothetical protein | SAMN04244553_0425 | Not Available | Negative | 230487 - 230825 | 12580.8 |
| transcriptional regulator, tetr family | SAMN04244553_0426 | Not Available | Negative | 230875 - 231504 | 23100.3 |
| hypothetical protein | SAMN04244553_0427 | Not Available | Positive | 231695 - 232486 | 28871.7 |
| hypothetical protein | SAMN04244553_0428 | Not Available | Negative | 232504 - 233151 | 23015.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

