Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMN04244553_3593 | Not Available | Negative | 3704805 - 3705263 | 16564.2 |
| hypothetical protein | SAMN04244553_3594 | Not Available | Negative | 3705279 - 3705515 | 8604.97 |
| Major capsid protein | SAMN04244553_3595 | Not Available | Negative | 3705520 - 3706473 | 33426.6 |
| Scaffolding protein | SAMN04244553_3596 | Not Available | Negative | 3706525 - 3707142 | 22340.4 |
| Muf-like minor capsid protein | SAMN04244553_3597 | Not Available | Negative | 3707199 - 3708137 | 34581.5 |
| Portal protein | SAMN04244553_3598 | Not Available | Negative | 3708137 - 3709624 | 54492.9 |
| Terminase | SAMN04244553_3599 | Not Available | Negative | 3709644 - 3711443 | 67936.2 |
| Terminase small subunit | SAMN04244553_3600 | Not Available | Negative | 3711433 - 3711822 | 14133.5 |
| Hnh endonuclease | SAMN04244553_3602 | Not Available | Negative | 3712660 - 3712986 | 12101.1 |
| Hypothetical protein | SAMN04244553_3603 | Not Available | Negative | 3712983 - 3713384 | 14899.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

